Uses of Class
fr.ifremer.allegro.referential.taxon.ReferenceTaxon

Packages that use ReferenceTaxon
fr.ifremer.allegro.administration.programStrategy   
fr.ifremer.allegro.administration.user.ageReader   
fr.ifremer.allegro.data.batch   
fr.ifremer.allegro.data.batch.denormalized   
fr.ifremer.allegro.data.sample   
fr.ifremer.allegro.referential.conversion   
fr.ifremer.allegro.referential.taxon   
fr.ifremer.allegro.technical.history   
 

Uses of ReferenceTaxon in fr.ifremer.allegro.administration.programStrategy
 

Methods in fr.ifremer.allegro.administration.programStrategy that return ReferenceTaxon
 ReferenceTaxon ReferenceTaxonStrategyPK.getReferenceTaxon()
           
 

Methods in fr.ifremer.allegro.administration.programStrategy with parameters of type ReferenceTaxon
 java.lang.Object ReferenceTaxonStrategyDao.create(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.create(fr.ifremer.allegro.referential.taxon.ReferenceTaxon,fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional flag called transform.
 java.lang.Object ReferenceTaxonStrategyDaoBase.create(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 java.lang.Object ReferenceTaxonStrategyDao.create(int transform, java.lang.Short priorityLevel, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.create(java.lang.Short,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional flag called transform.
 java.lang.Object ReferenceTaxonStrategyDaoBase.create(int transform, java.lang.Short priorityLevel, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.create(ReferenceTaxon referenceTaxon, Strategy strategy)
           Creates a new fr.ifremer.allegro.administration.programStrategy.ReferenceTaxonStrategy instance from only required properties (attributes and association ends) and adds it to the persistent store.
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.create(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.create(java.lang.Short priorityLevel, ReferenceTaxon referenceTaxon, Strategy strategy)
           Creates a new fr.ifremer.allegro.administration.programStrategy.ReferenceTaxonStrategy instance from all attributes and properties and adds it to the persistent store.
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.create(java.lang.Short priorityLevel, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 java.lang.Object ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(fr.ifremer.allegro.referential.taxon.ReferenceTaxon, fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional flag called transform.
 java.lang.Object ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByIdentifiers(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 java.lang.Object ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon, fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional argument called queryString.
 java.lang.Object ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByIdentifiers(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByIdentifiers(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByIdentifiers(fr.ifremer.allegro.referential.taxon.ReferenceTaxon, fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional argument called queryString.
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByIdentifiers(java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 java.lang.Object ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(fr.ifremer.allegro.referential.taxon.ReferenceTaxon, fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional flag called transform.
 java.lang.Object ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByNaturalId(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 java.lang.Object ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon, fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional argument called queryString.
 java.lang.Object ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByNaturalId(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByNaturalId(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByNaturalId(fr.ifremer.allegro.referential.taxon.ReferenceTaxon, fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional argument called queryString.
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByNaturalId(java.lang.String queryString, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonStrategyDao.findReferenceTaxonStrategyByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection ReferenceTaxonStrategyDaoBase.findReferenceTaxonStrategyByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.lang.Object ReferenceTaxonStrategyDao.load(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           Does the same thing as ReferenceTaxonStrategyDao.load(fr.ifremer.allegro.referential.taxon.ReferenceTaxon,fr.ifremer.allegro.administration.programStrategy.Strategy) with an additional flag called transform.
 java.lang.Object ReferenceTaxonStrategyDaoBase.load(int transform, ReferenceTaxon referenceTaxon, Strategy strategy)
           
 ReferenceTaxonStrategy ReferenceTaxonStrategyDao.load(ReferenceTaxon referenceTaxon, Strategy strategy)
          Loads an instance of fr.ifremer.allegro.administration.programStrategy.ReferenceTaxonStrategy from the persistent store.
 ReferenceTaxonStrategy ReferenceTaxonStrategyDaoBase.load(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 void ReferenceTaxonStrategyDao.remove(ReferenceTaxon referenceTaxon, Strategy strategy)
          Removes the instance of fr.ifremer.allegro.administration.programStrategy.ReferenceTaxonStrategy having the given identifiers from the persistent store.
 void ReferenceTaxonStrategyDaoBase.remove(ReferenceTaxon referenceTaxon, Strategy strategy)
           
 void ReferenceTaxonStrategyPK.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.administration.user.ageReader
 

Methods in fr.ifremer.allegro.administration.user.ageReader that return ReferenceTaxon
 ReferenceTaxon AgeReaderQualification.getReferenceTaxon()
           
 

Methods in fr.ifremer.allegro.administration.user.ageReader with parameters of type ReferenceTaxon
 AgeReaderQualification AgeReaderQualificationDao.create(java.util.Collection locations, java.lang.Integer qualificationLevel, ReferenceTaxon referenceTaxon, java.util.Date startDate)
           Creates a new fr.ifremer.allegro.administration.user.ageReader.AgeReaderQualification instance from only required properties (attributes and association ends) and adds it to the persistent store.
 AgeReaderQualification AgeReaderQualificationDaoBase.create(java.util.Collection locations, java.lang.Integer qualificationLevel, ReferenceTaxon referenceTaxon, java.util.Date startDate)
           
 AgeReaderQualification AgeReaderQualificationDao.create(java.util.Date startDate, java.util.Date endDate, java.lang.Integer qualificationLevel, java.util.Collection people, ReferenceTaxon referenceTaxon, java.util.Collection locations)
           Creates a new fr.ifremer.allegro.administration.user.ageReader.AgeReaderQualification instance from all attributes and properties and adds it to the persistent store.
 AgeReaderQualification AgeReaderQualificationDaoBase.create(java.util.Date startDate, java.util.Date endDate, java.lang.Integer qualificationLevel, java.util.Collection people, ReferenceTaxon referenceTaxon, java.util.Collection locations)
           
 java.lang.Object AgeReaderQualificationDao.create(int transform, java.util.Collection locations, java.lang.Integer qualificationLevel, ReferenceTaxon referenceTaxon, java.util.Date startDate)
           Does the same thing as AgeReaderQualificationDao.create(java.util.Collection,java.lang.Integer,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Date) with an additional flag called transform.
 java.lang.Object AgeReaderQualificationDaoBase.create(int transform, java.util.Collection locations, java.lang.Integer qualificationLevel, ReferenceTaxon referenceTaxon, java.util.Date startDate)
           
 java.lang.Object AgeReaderQualificationDao.create(int transform, java.util.Date startDate, java.util.Date endDate, java.lang.Integer qualificationLevel, java.util.Collection people, ReferenceTaxon referenceTaxon, java.util.Collection locations)
           Does the same thing as AgeReaderQualificationDao.create(java.util.Date,java.util.Date,java.lang.Integer,java.util.Collection,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Collection) with an additional flag called transform.
 java.lang.Object AgeReaderQualificationDaoBase.create(int transform, java.util.Date startDate, java.util.Date endDate, java.lang.Integer qualificationLevel, java.util.Collection people, ReferenceTaxon referenceTaxon, java.util.Collection locations)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as AgeReaderQualificationDao.findAgeReaderQualificationByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection AgeReaderQualificationDaoBase.findAgeReaderQualificationByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
static AgeReaderQualification AgeReaderQualification.Factory.newInstance(java.util.Date startDate, java.util.Date endDate, java.lang.Integer qualificationLevel, java.util.Collection people, ReferenceTaxon referenceTaxon, java.util.Collection locations)
          Constructs a new instance of AgeReaderQualification, taking all possible properties (except the identifier(s))as arguments.
static AgeReaderQualification AgeReaderQualification.Factory.newInstance(java.util.Date startDate, java.lang.Integer qualificationLevel, ReferenceTaxon referenceTaxon, java.util.Collection locations)
          Constructs a new instance of AgeReaderQualification, taking all required and/or read-only properties as arguments.
 void AgeReaderQualification.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.data.batch
 

Methods in fr.ifremer.allegro.data.batch that return ReferenceTaxon
 ReferenceTaxon SortingBatch.getReferenceTaxon()
           
 

Methods in fr.ifremer.allegro.data.batch with parameters of type ReferenceTaxon
 java.lang.Object SortingBatchDao.create(int transform, java.lang.Short rankOrder, java.lang.Float subgroupCount, java.lang.Short individualCount, java.lang.Boolean childBatchsReplication, java.lang.Boolean exhaustiveInventory, java.lang.String comments, java.util.Collection childBatchs, Batch parentBatch, java.util.Collection quantificationMeasurements, java.util.Collection produces, java.lang.Float samplingRatio, java.lang.String samplingRatioText, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection sortingMeasurements)
           Does the same thing as SortingBatchDao.create(java.lang.Short,java.lang.Float,java.lang.Short,java.lang.Boolean,java.lang.Boolean,java.lang.String,java.util.Collection,fr.ifremer.allegro.data.batch.Batch,java.util.Collection,java.util.Collection,java.lang.Float,java.lang.String,fr.ifremer.allegro.referential.taxon.TaxonGroup,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Collection) with an additional flag called transform.
 java.lang.Object SortingBatchDaoBase.create(int transform, java.lang.Short rankOrder, java.lang.Float subgroupCount, java.lang.Short individualCount, java.lang.Boolean childBatchsReplication, java.lang.Boolean exhaustiveInventory, java.lang.String comments, java.util.Collection childBatchs, Batch parentBatch, java.util.Collection quantificationMeasurements, java.util.Collection produces, java.lang.Float samplingRatio, java.lang.String samplingRatioText, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection sortingMeasurements)
           
 Batch SortingBatchDao.create(java.lang.Short rankOrder, java.lang.Float subgroupCount, java.lang.Short individualCount, java.lang.Boolean childBatchsReplication, java.lang.Boolean exhaustiveInventory, java.lang.String comments, java.util.Collection childBatchs, Batch parentBatch, java.util.Collection quantificationMeasurements, java.util.Collection produces, java.lang.Float samplingRatio, java.lang.String samplingRatioText, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection sortingMeasurements)
           Creates a new fr.ifremer.allegro.data.batch.SortingBatch instance from all attributes and properties and adds it to the persistent store.
 SortingBatch SortingBatchDaoBase.create(java.lang.Short rankOrder, java.lang.Float subgroupCount, java.lang.Short individualCount, java.lang.Boolean childBatchsReplication, java.lang.Boolean exhaustiveInventory, java.lang.String comments, java.util.Collection childBatchs, Batch parentBatch, java.util.Collection quantificationMeasurements, java.util.Collection produces, java.lang.Float samplingRatio, java.lang.String samplingRatioText, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection sortingMeasurements)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SortingBatchDao.findSortingBatchByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as SortingBatchDao.findSortingBatchByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection SortingBatchDaoBase.findSortingBatchByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
static SortingBatch SortingBatch.Factory.newInstance(java.lang.Short rankOrder, java.lang.Float subgroupCount, java.lang.Short individualCount, java.lang.Boolean childBatchsReplication, java.lang.Boolean exhaustiveInventory, java.lang.String comments, java.util.Collection childBatchs, Batch parentBatch, java.util.Collection quantificationMeasurements, java.util.Collection produces, java.lang.Float samplingRatio, java.lang.String samplingRatioText, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection sortingMeasurements)
          Constructs a new instance of SortingBatch, taking all possible properties (except the identifier(s))as arguments.
 void SortingBatch.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.data.batch.denormalized
 

Methods in fr.ifremer.allegro.data.batch.denormalized that return ReferenceTaxon
 ReferenceTaxon DenormalizedBatch.getReferenceTaxon()
           
 

Methods in fr.ifremer.allegro.data.batch.denormalized with parameters of type ReferenceTaxon
 java.lang.Object DenormalizedBatchDao.create(int transform, java.lang.Short rankOrder, java.lang.Float weight, java.lang.Float elevateWeight, java.lang.Integer individualcount, java.lang.Integer elevateIndividualCount, java.lang.Float numericalValue, java.lang.Boolean exhaustiveInventory, java.lang.Boolean childBatchsReplication, java.lang.String comments, Parameter numericalParameter, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection denormalisedBatchSortingValues)
           Does the same thing as DenormalizedBatchDao.create(java.lang.Short,java.lang.Float,java.lang.Float,java.lang.Integer,java.lang.Integer,java.lang.Float,java.lang.Boolean,java.lang.Boolean,java.lang.String,fr.ifremer.allegro.referential.pmfm.Parameter,fr.ifremer.allegro.referential.taxon.TaxonGroup,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Collection) with an additional flag called transform.
 java.lang.Object DenormalizedBatchDaoBase.create(int transform, java.lang.Short rankOrder, java.lang.Float weight, java.lang.Float elevateWeight, java.lang.Integer individualcount, java.lang.Integer elevateIndividualCount, java.lang.Float numericalValue, java.lang.Boolean exhaustiveInventory, java.lang.Boolean childBatchsReplication, java.lang.String comments, Parameter numericalParameter, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection denormalisedBatchSortingValues)
           
 DenormalizedBatch DenormalizedBatchDao.create(java.lang.Short rankOrder, java.lang.Float weight, java.lang.Float elevateWeight, java.lang.Integer individualcount, java.lang.Integer elevateIndividualCount, java.lang.Float numericalValue, java.lang.Boolean exhaustiveInventory, java.lang.Boolean childBatchsReplication, java.lang.String comments, Parameter numericalParameter, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection denormalisedBatchSortingValues)
           Creates a new fr.ifremer.allegro.data.batch.denormalized.DenormalizedBatch instance from all attributes and properties and adds it to the persistent store.
 DenormalizedBatch DenormalizedBatchDaoBase.create(java.lang.Short rankOrder, java.lang.Float weight, java.lang.Float elevateWeight, java.lang.Integer individualcount, java.lang.Integer elevateIndividualCount, java.lang.Float numericalValue, java.lang.Boolean exhaustiveInventory, java.lang.Boolean childBatchsReplication, java.lang.String comments, Parameter numericalParameter, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection denormalisedBatchSortingValues)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as DenormalizedBatchDao.findDenormalizedBatchByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection DenormalizedBatchDaoBase.findDenormalizedBatchByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
static DenormalizedBatch DenormalizedBatch.Factory.newInstance(java.lang.Short rankOrder, java.lang.Float weight, java.lang.Float elevateWeight, java.lang.Integer individualcount, java.lang.Integer elevateIndividualCount, java.lang.Float numericalValue, java.lang.Boolean exhaustiveInventory, java.lang.Boolean childBatchsReplication, java.lang.String comments, Parameter numericalParameter, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, java.util.Collection denormalisedBatchSortingValues)
          Constructs a new instance of DenormalizedBatch, taking all possible properties (except the identifier(s))as arguments.
 void DenormalizedBatch.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.data.sample
 

Methods in fr.ifremer.allegro.data.sample that return ReferenceTaxon
 ReferenceTaxon Sample.getReferenceTaxon()
           Taxon (esp??ce scientifique) caract??ristant l'??chantillon (optionnel)
 

Methods in fr.ifremer.allegro.data.sample with parameters of type ReferenceTaxon
 java.lang.Object SampleDao.create(int transform, java.lang.String label, java.util.Date sampleDate, java.lang.Short individualCount, java.lang.Float size, java.lang.String comments, java.util.Date creationDate, java.util.Date controlDate, java.util.Date validationDate, java.util.Date qualificationDate, java.lang.String qualificationComments, java.sql.Timestamp updateDate, java.util.Collection sampleMeasurements, Sample parentSample, java.util.Collection childSamples, Matrix matrix, Unit sizeUnit, Batch batch, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, User recorderUser, Program program, Department recorderDepartment, QualityFlag qualityFlag, FishingOperation fishingOperation, java.util.Collection fishingAreas)
           Does the same thing as SampleDao.create(java.lang.String,java.util.Date,java.lang.Short,java.lang.Float,java.lang.String,java.util.Date,java.util.Date,java.util.Date,java.util.Date,java.lang.String,java.sql.Timestamp,java.util.Collection,fr.ifremer.allegro.data.sample.Sample,java.util.Collection,fr.ifremer.allegro.referential.pmfm.Matrix,fr.ifremer.allegro.referential.pmfm.Unit,fr.ifremer.allegro.data.batch.Batch,fr.ifremer.allegro.referential.taxon.TaxonGroup,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,fr.ifremer.allegro.administration.user.User,fr.ifremer.allegro.administration.programStrategy.Program,fr.ifremer.allegro.administration.user.Department,fr.ifremer.allegro.referential.QualityFlag,fr.ifremer.allegro.data.operation.FishingOperation,java.util.Collection) with an additional flag called transform.
 java.lang.Object SampleDaoBase.create(int transform, java.lang.String label, java.util.Date sampleDate, java.lang.Short individualCount, java.lang.Float size, java.lang.String comments, java.util.Date creationDate, java.util.Date controlDate, java.util.Date validationDate, java.util.Date qualificationDate, java.lang.String qualificationComments, java.sql.Timestamp updateDate, java.util.Collection sampleMeasurements, Sample parentSample, java.util.Collection childSamples, Matrix matrix, Unit sizeUnit, Batch batch, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, User recorderUser, Program program, Department recorderDepartment, QualityFlag qualityFlag, FishingOperation fishingOperation, java.util.Collection fishingAreas)
           
 Sample SampleDao.create(java.lang.String label, java.util.Date sampleDate, java.lang.Short individualCount, java.lang.Float size, java.lang.String comments, java.util.Date creationDate, java.util.Date controlDate, java.util.Date validationDate, java.util.Date qualificationDate, java.lang.String qualificationComments, java.sql.Timestamp updateDate, java.util.Collection sampleMeasurements, Sample parentSample, java.util.Collection childSamples, Matrix matrix, Unit sizeUnit, Batch batch, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, User recorderUser, Program program, Department recorderDepartment, QualityFlag qualityFlag, FishingOperation fishingOperation, java.util.Collection fishingAreas)
           Creates a new fr.ifremer.allegro.data.sample.Sample instance from all attributes and properties and adds it to the persistent store.
 Sample SampleDaoBase.create(java.lang.String label, java.util.Date sampleDate, java.lang.Short individualCount, java.lang.Float size, java.lang.String comments, java.util.Date creationDate, java.util.Date controlDate, java.util.Date validationDate, java.util.Date qualificationDate, java.lang.String qualificationComments, java.sql.Timestamp updateDate, java.util.Collection sampleMeasurements, Sample parentSample, java.util.Collection childSamples, Matrix matrix, Unit sizeUnit, Batch batch, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, User recorderUser, Program program, Department recorderDepartment, QualityFlag qualityFlag, FishingOperation fishingOperation, java.util.Collection fishingAreas)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection SampleDao.findSampleByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as SampleDao.findSampleByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection SampleDaoBase.findSampleByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
static Sample Sample.Factory.newInstance(java.lang.String label, java.util.Date sampleDate, java.lang.Short individualCount, java.lang.Float size, java.lang.String comments, java.util.Date creationDate, java.util.Date controlDate, java.util.Date validationDate, java.util.Date qualificationDate, java.lang.String qualificationComments, java.sql.Timestamp updateDate, java.util.Collection sampleMeasurements, Sample parentSample, java.util.Collection childSamples, Matrix matrix, Unit sizeUnit, Batch batch, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, User recorderUser, Program program, Department recorderDepartment, QualityFlag qualityFlag, FishingOperation fishingOperation, java.util.Collection fishingAreas)
          Constructs a new instance of Sample, taking all possible properties (except the identifier(s))as arguments.
 void Sample.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.referential.conversion
 

Methods in fr.ifremer.allegro.referential.conversion that return ReferenceTaxon
 ReferenceTaxon WeightLengthConversion.getReferenceTaxon()
           
 

Methods in fr.ifremer.allegro.referential.conversion with parameters of type ReferenceTaxon
 WeightLengthConversion WeightLengthConversionDao.create(java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer endMonth, Location location, ReferenceTaxon referenceTaxon, java.lang.Integer startMonth)
           Creates a new fr.ifremer.allegro.referential.conversion.WeightLengthConversion instance from only required properties (attributes and association ends) and adds it to the persistent store.
 WeightLengthConversion WeightLengthConversionDaoBase.create(java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer endMonth, Location location, ReferenceTaxon referenceTaxon, java.lang.Integer startMonth)
           
 WeightLengthConversion WeightLengthConversionDao.create(java.lang.Integer startMonth, java.lang.Integer endMonth, java.lang.String description, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer year, java.sql.Timestamp updateDate, Location location, QualitativeValue sex, ReferenceTaxon referenceTaxon)
           Creates a new fr.ifremer.allegro.referential.conversion.WeightLengthConversion instance from all attributes and properties and adds it to the persistent store.
 WeightLengthConversion WeightLengthConversionDaoBase.create(java.lang.Integer startMonth, java.lang.Integer endMonth, java.lang.String description, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer year, java.sql.Timestamp updateDate, Location location, QualitativeValue sex, ReferenceTaxon referenceTaxon)
           
 java.lang.Object WeightLengthConversionDao.create(int transform, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer endMonth, Location location, ReferenceTaxon referenceTaxon, java.lang.Integer startMonth)
           Does the same thing as WeightLengthConversionDao.create(java.lang.Float,java.lang.Float,java.lang.Integer,fr.ifremer.allegro.referential.location.Location,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.lang.Integer) with an additional flag called transform.
 java.lang.Object WeightLengthConversionDaoBase.create(int transform, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer endMonth, Location location, ReferenceTaxon referenceTaxon, java.lang.Integer startMonth)
           
 java.lang.Object WeightLengthConversionDao.create(int transform, java.lang.Integer startMonth, java.lang.Integer endMonth, java.lang.String description, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer year, java.sql.Timestamp updateDate, Location location, QualitativeValue sex, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.create(java.lang.Integer,java.lang.Integer,java.lang.String,java.lang.Float,java.lang.Float,java.lang.Integer,java.sql.Timestamp,fr.ifremer.allegro.referential.location.Location,fr.ifremer.allegro.referential.pmfm.QualitativeValue,fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object WeightLengthConversionDaoBase.create(int transform, java.lang.Integer startMonth, java.lang.Integer endMonth, java.lang.String description, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer year, java.sql.Timestamp updateDate, Location location, QualitativeValue sex, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as WeightLengthConversionDao.findWeightLengthConversionByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection WeightLengthConversionDaoBase.findWeightLengthConversionByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
static WeightLengthConversion WeightLengthConversion.Factory.newInstance(java.lang.Integer startMonth, java.lang.Integer endMonth, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, Location location, ReferenceTaxon referenceTaxon)
          Constructs a new instance of WeightLengthConversion, taking all required and/or read-only properties as arguments.
static WeightLengthConversion WeightLengthConversion.Factory.newInstance(java.lang.Integer startMonth, java.lang.Integer endMonth, java.lang.String description, java.lang.Float conversionCoefficientA, java.lang.Float conversionCoefficientB, java.lang.Integer year, java.sql.Timestamp updateDate, Location location, QualitativeValue sex, ReferenceTaxon referenceTaxon)
          Constructs a new instance of WeightLengthConversion, taking all possible properties (except the identifier(s))as arguments.
 void WeightLengthConversion.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.referential.taxon
 

Subclasses of ReferenceTaxon in fr.ifremer.allegro.referential.taxon
 class ReferenceTaxonImpl
           
 

Methods in fr.ifremer.allegro.referential.taxon that return ReferenceTaxon
 ReferenceTaxon ReferenceTaxonDaoImpl.clusterReferenceTaxonToEntity(ClusterReferenceTaxon clusterReferenceTaxon)
           
 ReferenceTaxon ReferenceTaxonDao.clusterReferenceTaxonToEntity(ClusterReferenceTaxon clusterReferenceTaxon)
          Converts an instance of type ClusterReferenceTaxon to this DAO's entity.
 ReferenceTaxon ReferenceTaxonDao.create(ReferenceTaxon referenceTaxon)
          Creates an instance of fr.ifremer.allegro.referential.taxon.ReferenceTaxon and adds it to the persistent store.
 ReferenceTaxon ReferenceTaxonDaoBase.create(ReferenceTaxon referenceTaxon)
           
 ReferenceTaxon ReferenceTaxonDao.create(java.sql.Timestamp updateDate, java.util.Collection referenceTaxonStrategies)
           Creates a new fr.ifremer.allegro.referential.taxon.ReferenceTaxon instance from all attributes and properties and adds it to the persistent store.
 ReferenceTaxon ReferenceTaxonDaoBase.create(java.sql.Timestamp updateDate, java.util.Collection referenceTaxonStrategies)
           
 ReferenceTaxon ReferenceTaxonDao.createFromClusterReferenceTaxon(ClusterReferenceTaxon clusterReferenceTaxon)
           
 ReferenceTaxon ReferenceTaxonDaoBase.createFromClusterReferenceTaxon(ClusterReferenceTaxon clusterReferenceTaxon)
           
 ReferenceTaxon ReferenceTaxonDao.findReferenceTaxonById(java.lang.Integer id)
           
 ReferenceTaxon ReferenceTaxonDaoBase.findReferenceTaxonById(java.lang.Integer id)
           
 ReferenceTaxon ReferenceTaxonDao.findReferenceTaxonById(java.lang.String queryString, java.lang.Integer id)
           Does the same thing as ReferenceTaxonDao.findReferenceTaxonById(java.lang.Integer) with an additional argument called queryString.
 ReferenceTaxon ReferenceTaxonDaoBase.findReferenceTaxonById(java.lang.String queryString, java.lang.Integer id)
           
 ReferenceTaxon ReferenceTaxonDao.findReferenceTaxonByNaturalId(java.lang.Integer id)
           
 ReferenceTaxon ReferenceTaxonDaoBase.findReferenceTaxonByNaturalId(java.lang.Integer id)
           
 ReferenceTaxon ReferenceTaxonDao.findReferenceTaxonByNaturalId(java.lang.String queryString, java.lang.Integer id)
           Does the same thing as ReferenceTaxonDao.findReferenceTaxonByNaturalId(java.lang.Integer) with an additional argument called queryString.
 ReferenceTaxon ReferenceTaxonDaoBase.findReferenceTaxonByNaturalId(java.lang.String queryString, java.lang.Integer id)
           
 ReferenceTaxon TaxonName.getReferenceTaxon()
           
 ReferenceTaxon VirtualComponentPK.getReferenceTaxon()
           
 ReferenceTaxon TaxonGroupHistoricalRecord.getReferenceTaxon()
           
protected  ReferenceTaxon ReferenceTaxonDaoImpl.handleCreateFromClusterReferenceTaxon(ClusterReferenceTaxon clusterReferenceTaxon)
           
protected abstract  ReferenceTaxon ReferenceTaxonDaoBase.handleCreateFromClusterReferenceTaxon(ClusterReferenceTaxon clusterReferenceTaxon)
          Performs the core logic for ReferenceTaxonDaoBase.createFromClusterReferenceTaxon(fr.ifremer.allegro.referential.taxon.generic.cluster.ClusterReferenceTaxon)
 ReferenceTaxon ReferenceTaxonDao.load(java.lang.Integer id)
          Loads an instance of fr.ifremer.allegro.referential.taxon.ReferenceTaxon from the persistent store.
 ReferenceTaxon ReferenceTaxonDaoBase.load(java.lang.Integer id)
           
static ReferenceTaxon ReferenceTaxon.Factory.newInstance()
          Constructs a new instance of ReferenceTaxon.
static ReferenceTaxon ReferenceTaxon.Factory.newInstance(java.sql.Timestamp updateDate, java.util.Collection referenceTaxonStrategies)
          Constructs a new instance of ReferenceTaxon, taking all possible properties (except the identifier(s))as arguments.
 ReferenceTaxon ReferenceTaxonDaoImpl.remoteReferenceTaxonFullVOToEntity(RemoteReferenceTaxonFullVO remoteReferenceTaxonFullVO)
           
 ReferenceTaxon ReferenceTaxonDao.remoteReferenceTaxonFullVOToEntity(RemoteReferenceTaxonFullVO remoteReferenceTaxonFullVO)
          Converts an instance of type RemoteReferenceTaxonFullVO to this DAO's entity.
 ReferenceTaxon ReferenceTaxonDaoImpl.remoteReferenceTaxonNaturalIdToEntity(RemoteReferenceTaxonNaturalId remoteReferenceTaxonNaturalId)
           
 ReferenceTaxon ReferenceTaxonDao.remoteReferenceTaxonNaturalIdToEntity(RemoteReferenceTaxonNaturalId remoteReferenceTaxonNaturalId)
          Converts an instance of type RemoteReferenceTaxonNaturalId to this DAO's entity.
protected  ReferenceTaxon ReferenceTaxonDaoBase.toEntity(java.lang.Object[] row)
           
 

Methods in fr.ifremer.allegro.referential.taxon with parameters of type ReferenceTaxon
 void ReferenceTaxonDaoImpl.clusterReferenceTaxonToEntity(ClusterReferenceTaxon source, ReferenceTaxon target, boolean copyIfNull)
           
 void ReferenceTaxonDao.clusterReferenceTaxonToEntity(ClusterReferenceTaxon source, ReferenceTaxon target, boolean copyIfNull)
          Copies the fields of ClusterReferenceTaxon to the specified entity.
 void ReferenceTaxonDaoBase.clusterReferenceTaxonToEntity(ClusterReferenceTaxon source, ReferenceTaxon target, boolean copyIfNull)
           
 TaxonName TaxonNameDao.create(java.util.Date creationDate, java.lang.Boolean isNaming, java.lang.Boolean isObsolete, java.lang.Boolean isReferent, java.lang.Boolean isTemporary, java.lang.Boolean isVirtual, java.lang.String name, ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonomicLevel taxonomicLevel, java.lang.Integer upperRank)
           Creates a new fr.ifremer.allegro.referential.taxon.TaxonName instance from only required properties (attributes and association ends) and adds it to the persistent store.
 TaxonName TaxonNameDaoBase.create(java.util.Date creationDate, java.lang.Boolean isNaming, java.lang.Boolean isObsolete, java.lang.Boolean isReferent, java.lang.Boolean isTemporary, java.lang.Boolean isVirtual, java.lang.String name, ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonomicLevel taxonomicLevel, java.lang.Integer upperRank)
           
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDao.create(java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.sql.Timestamp updateDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           Creates a new fr.ifremer.allegro.referential.taxon.TaxonGroupHistoricalRecord instance from all attributes and properties and adds it to the persistent store.
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDaoBase.create(java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.sql.Timestamp updateDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 java.lang.Object TaxonNameDao.create(int transform, java.util.Date creationDate, java.lang.Boolean isNaming, java.lang.Boolean isObsolete, java.lang.Boolean isReferent, java.lang.Boolean isTemporary, java.lang.Boolean isVirtual, java.lang.String name, ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonomicLevel taxonomicLevel, java.lang.Integer upperRank)
           Does the same thing as TaxonNameDao.create(java.util.Date,java.lang.Boolean,java.lang.Boolean,java.lang.Boolean,java.lang.Boolean,java.lang.Boolean,java.lang.String,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Date,fr.ifremer.allegro.referential.taxon.TaxonomicLevel,java.lang.Integer) with an additional flag called transform.
 java.lang.Object TaxonNameDaoBase.create(int transform, java.util.Date creationDate, java.lang.Boolean isNaming, java.lang.Boolean isObsolete, java.lang.Boolean isReferent, java.lang.Boolean isTemporary, java.lang.Boolean isVirtual, java.lang.String name, ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonomicLevel taxonomicLevel, java.lang.Integer upperRank)
           
 java.lang.Object TaxonGroupHistoricalRecordDao.create(int transform, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.sql.Timestamp updateDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.create(java.util.Date,java.util.Date,java.lang.String,java.sql.Timestamp,fr.ifremer.allegro.referential.taxon.TaxonGroup,fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object TaxonGroupHistoricalRecordDaoBase.create(int transform, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.sql.Timestamp updateDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 java.lang.Object ReferenceTaxonDao.create(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as ReferenceTaxonDao.create(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object ReferenceTaxonDaoBase.create(int transform, ReferenceTaxon referenceTaxon)
           
 java.lang.Object TaxonGroupHistoricalRecordDao.create(int transform, ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonGroup taxonGroup)
           Does the same thing as TaxonGroupHistoricalRecordDao.create(fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Date,fr.ifremer.allegro.referential.taxon.TaxonGroup) with an additional flag called transform.
 java.lang.Object TaxonGroupHistoricalRecordDaoBase.create(int transform, ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonGroup taxonGroup)
           
 java.lang.Object VirtualComponentDao.create(int transform, ReferenceTaxon referenceTaxon, TaxonName taxonName)
           Does the same thing as VirtualComponentDao.create(fr.ifremer.allegro.referential.taxon.ReferenceTaxon,fr.ifremer.allegro.referential.taxon.TaxonName) with an additional flag called transform.
 java.lang.Object VirtualComponentDaoBase.create(int transform, ReferenceTaxon referenceTaxon, TaxonName taxonName)
           
 java.lang.Object TaxonNameDao.create(int transform, java.lang.String name, java.lang.String completeName, java.lang.Boolean isNaming, java.lang.Boolean isReferent, java.lang.Integer upperRank, java.lang.Boolean isVirtual, java.lang.Boolean isObsolete, java.lang.Boolean isTemporary, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.util.Date creationDate, java.sql.Timestamp updateDate, ReferenceTaxon referenceTaxon, java.util.Collection childTaxonNames, TaxonName parentTaxonName, TaxonomicLevel taxonomicLevel, java.util.Collection taxonNamehistory, java.util.Collection parentTaxonNameHistory, Citation citation)
           Does the same thing as TaxonNameDao.create(java.lang.String,java.lang.String,java.lang.Boolean,java.lang.Boolean,java.lang.Integer,java.lang.Boolean,java.lang.Boolean,java.lang.Boolean,java.util.Date,java.util.Date,java.lang.String,java.util.Date,java.sql.Timestamp,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,java.util.Collection,fr.ifremer.allegro.referential.taxon.TaxonName,fr.ifremer.allegro.referential.taxon.TaxonomicLevel,java.util.Collection,java.util.Collection,fr.ifremer.allegro.referential.taxon.Citation) with an additional flag called transform.
 java.lang.Object TaxonNameDaoBase.create(int transform, java.lang.String name, java.lang.String completeName, java.lang.Boolean isNaming, java.lang.Boolean isReferent, java.lang.Integer upperRank, java.lang.Boolean isVirtual, java.lang.Boolean isObsolete, java.lang.Boolean isTemporary, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.util.Date creationDate, java.sql.Timestamp updateDate, ReferenceTaxon referenceTaxon, java.util.Collection childTaxonNames, TaxonName parentTaxonName, TaxonomicLevel taxonomicLevel, java.util.Collection taxonNamehistory, java.util.Collection parentTaxonNameHistory, Citation citation)
           
 java.lang.Object VirtualComponentDao.create(int transform, java.sql.Timestamp updateDate, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.create(java.sql.Timestamp,fr.ifremer.allegro.referential.taxon.TaxonName,fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object VirtualComponentDaoBase.create(int transform, java.sql.Timestamp updateDate, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 ReferenceTaxon ReferenceTaxonDao.create(ReferenceTaxon referenceTaxon)
          Creates an instance of fr.ifremer.allegro.referential.taxon.ReferenceTaxon and adds it to the persistent store.
 ReferenceTaxon ReferenceTaxonDaoBase.create(ReferenceTaxon referenceTaxon)
           
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDao.create(ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonGroup taxonGroup)
           Creates a new fr.ifremer.allegro.referential.taxon.TaxonGroupHistoricalRecord instance from only required properties (attributes and association ends) and adds it to the persistent store.
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDaoBase.create(ReferenceTaxon referenceTaxon, java.util.Date startDate, TaxonGroup taxonGroup)
           
 VirtualComponent VirtualComponentDao.create(ReferenceTaxon referenceTaxon, TaxonName taxonName)
           Creates a new fr.ifremer.allegro.referential.taxon.VirtualComponent instance from only required properties (attributes and association ends) and adds it to the persistent store.
 VirtualComponent VirtualComponentDaoBase.create(ReferenceTaxon referenceTaxon, TaxonName taxonName)
           
 TaxonName TaxonNameDao.create(java.lang.String name, java.lang.String completeName, java.lang.Boolean isNaming, java.lang.Boolean isReferent, java.lang.Integer upperRank, java.lang.Boolean isVirtual, java.lang.Boolean isObsolete, java.lang.Boolean isTemporary, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.util.Date creationDate, java.sql.Timestamp updateDate, ReferenceTaxon referenceTaxon, java.util.Collection childTaxonNames, TaxonName parentTaxonName, TaxonomicLevel taxonomicLevel, java.util.Collection taxonNamehistory, java.util.Collection parentTaxonNameHistory, Citation citation)
           Creates a new fr.ifremer.allegro.referential.taxon.TaxonName instance from all attributes and properties and adds it to the persistent store.
 TaxonName TaxonNameDaoBase.create(java.lang.String name, java.lang.String completeName, java.lang.Boolean isNaming, java.lang.Boolean isReferent, java.lang.Integer upperRank, java.lang.Boolean isVirtual, java.lang.Boolean isObsolete, java.lang.Boolean isTemporary, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.util.Date creationDate, java.sql.Timestamp updateDate, ReferenceTaxon referenceTaxon, java.util.Collection childTaxonNames, TaxonName parentTaxonName, TaxonomicLevel taxonomicLevel, java.util.Collection taxonNamehistory, java.util.Collection parentTaxonNameHistory, Citation citation)
           
 VirtualComponent VirtualComponentDao.create(java.sql.Timestamp updateDate, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Creates a new fr.ifremer.allegro.referential.taxon.VirtualComponent instance from all attributes and properties and adds it to the persistent store.
 VirtualComponent VirtualComponentDaoBase.create(java.sql.Timestamp updateDate, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByNaturalId(java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 java.lang.Object TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(int transform, java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(java.util.Date, fr.ifremer.allegro.referential.taxon.TaxonGroup, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByNaturalId(int transform, java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 java.lang.Object TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(int transform, java.lang.String queryString, java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(int, java.util.Date, fr.ifremer.allegro.referential.taxon.TaxonGroup, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.lang.Object TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByNaturalId(int transform, java.lang.String queryString, java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(java.lang.String queryString, java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByNaturalId(java.util.Date, fr.ifremer.allegro.referential.taxon.TaxonGroup, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 TaxonGroupHistoricalRecord TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByNaturalId(java.lang.String queryString, java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonGroupHistoricalRecordDao.findTaxonGroupHistoricalRecordByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection TaxonGroupHistoricalRecordDaoBase.findTaxonGroupHistoricalRecordByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection TaxonNameDao.findTaxonNameByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as TaxonNameDao.findTaxonNameByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection TaxonNameDaoBase.findTaxonNameByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.lang.Object VirtualComponentDao.findVirtualComponentByIdentifiers(int transform, java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByIdentifiers(int, fr.ifremer.allegro.referential.taxon.TaxonName, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.lang.Object VirtualComponentDaoBase.findVirtualComponentByIdentifiers(int transform, java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 java.lang.Object VirtualComponentDao.findVirtualComponentByIdentifiers(int transform, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByIdentifiers(fr.ifremer.allegro.referential.taxon.TaxonName, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object VirtualComponentDaoBase.findVirtualComponentByIdentifiers(int transform, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDao.findVirtualComponentByIdentifiers(java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByIdentifiers(fr.ifremer.allegro.referential.taxon.TaxonName, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 VirtualComponent VirtualComponentDaoBase.findVirtualComponentByIdentifiers(java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDao.findVirtualComponentByIdentifiers(TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDaoBase.findVirtualComponentByIdentifiers(TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 java.lang.Object VirtualComponentDao.findVirtualComponentByNaturalId(int transform, java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByNaturalId(int, fr.ifremer.allegro.referential.taxon.TaxonName, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.lang.Object VirtualComponentDaoBase.findVirtualComponentByNaturalId(int transform, java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 java.lang.Object VirtualComponentDao.findVirtualComponentByNaturalId(int transform, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByNaturalId(fr.ifremer.allegro.referential.taxon.TaxonName, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object VirtualComponentDaoBase.findVirtualComponentByNaturalId(int transform, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDao.findVirtualComponentByNaturalId(java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByNaturalId(fr.ifremer.allegro.referential.taxon.TaxonName, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 VirtualComponent VirtualComponentDaoBase.findVirtualComponentByNaturalId(java.lang.String queryString, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDao.findVirtualComponentByNaturalId(TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDaoBase.findVirtualComponentByNaturalId(TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection VirtualComponentDao.findVirtualComponentByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.findVirtualComponentByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection VirtualComponentDaoBase.findVirtualComponentByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.lang.Object VirtualComponentDao.load(int transform, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           Does the same thing as VirtualComponentDao.load(fr.ifremer.allegro.referential.taxon.TaxonName,fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.lang.Object VirtualComponentDaoBase.load(int transform, TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 VirtualComponent VirtualComponentDao.load(TaxonName taxonName, ReferenceTaxon referenceTaxon)
          Loads an instance of fr.ifremer.allegro.referential.taxon.VirtualComponent from the persistent store.
 VirtualComponent VirtualComponentDaoBase.load(TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
static TaxonGroupHistoricalRecord TaxonGroupHistoricalRecord.Factory.newInstance(java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.sql.Timestamp updateDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
          Constructs a new instance of TaxonGroupHistoricalRecord, taking all possible properties (except the identifier(s))as arguments.
static TaxonGroupHistoricalRecord TaxonGroupHistoricalRecord.Factory.newInstance(java.util.Date startDate, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon)
          Constructs a new instance of TaxonGroupHistoricalRecord, taking all required and/or read-only properties as arguments.
static TaxonName TaxonName.Factory.newInstance(java.lang.String name, java.lang.Boolean isNaming, java.lang.Boolean isReferent, java.lang.Integer upperRank, java.lang.Boolean isVirtual, java.lang.Boolean isObsolete, java.lang.Boolean isTemporary, java.util.Date startDate, java.util.Date creationDate, ReferenceTaxon referenceTaxon, TaxonomicLevel taxonomicLevel)
          Constructs a new instance of TaxonName, taking all required and/or read-only properties as arguments.
static TaxonName TaxonName.Factory.newInstance(java.lang.String name, java.lang.String completeName, java.lang.Boolean isNaming, java.lang.Boolean isReferent, java.lang.Integer upperRank, java.lang.Boolean isVirtual, java.lang.Boolean isObsolete, java.lang.Boolean isTemporary, java.util.Date startDate, java.util.Date endDate, java.lang.String comments, java.util.Date creationDate, java.sql.Timestamp updateDate, ReferenceTaxon referenceTaxon, java.util.Collection childTaxonNames, TaxonName parentTaxonName, TaxonomicLevel taxonomicLevel, java.util.Collection taxonNamehistory, java.util.Collection parentTaxonNameHistory, Citation citation)
          Constructs a new instance of TaxonName, taking all possible properties (except the identifier(s))as arguments.
 void ReferenceTaxonDaoImpl.remoteReferenceTaxonFullVOToEntity(RemoteReferenceTaxonFullVO source, ReferenceTaxon target, boolean copyIfNull)
           
 void ReferenceTaxonDao.remoteReferenceTaxonFullVOToEntity(RemoteReferenceTaxonFullVO source, ReferenceTaxon target, boolean copyIfNull)
          Copies the fields of RemoteReferenceTaxonFullVO to the specified entity.
 void ReferenceTaxonDaoBase.remoteReferenceTaxonFullVOToEntity(RemoteReferenceTaxonFullVO source, ReferenceTaxon target, boolean copyIfNull)
           
 void ReferenceTaxonDaoImpl.remoteReferenceTaxonNaturalIdToEntity(RemoteReferenceTaxonNaturalId source, ReferenceTaxon target, boolean copyIfNull)
           
 void ReferenceTaxonDao.remoteReferenceTaxonNaturalIdToEntity(RemoteReferenceTaxonNaturalId source, ReferenceTaxon target, boolean copyIfNull)
          Copies the fields of RemoteReferenceTaxonNaturalId to the specified entity.
 void ReferenceTaxonDaoBase.remoteReferenceTaxonNaturalIdToEntity(RemoteReferenceTaxonNaturalId source, ReferenceTaxon target, boolean copyIfNull)
           
 void ReferenceTaxonDao.remove(ReferenceTaxon referenceTaxon)
          Removes the instance of fr.ifremer.allegro.referential.taxon.ReferenceTaxon from the persistent store.
 void ReferenceTaxonDaoBase.remove(ReferenceTaxon referenceTaxon)
           
 void VirtualComponentDao.remove(TaxonName taxonName, ReferenceTaxon referenceTaxon)
          Removes the instance of fr.ifremer.allegro.referential.taxon.VirtualComponent having the given identifiers from the persistent store.
 void VirtualComponentDaoBase.remove(TaxonName taxonName, ReferenceTaxon referenceTaxon)
           
 void TaxonName.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 void VirtualComponentPK.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 void TaxonGroupHistoricalRecord.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 ClusterReferenceTaxon ReferenceTaxonDaoImpl.toClusterReferenceTaxon(ReferenceTaxon entity)
           
 ClusterReferenceTaxon ReferenceTaxonDao.toClusterReferenceTaxon(ReferenceTaxon entity)
          Converts this DAO's entity to an object of type ClusterReferenceTaxon.
 ClusterReferenceTaxon ReferenceTaxonDaoBase.toClusterReferenceTaxon(ReferenceTaxon entity)
           
 void ReferenceTaxonDaoImpl.toClusterReferenceTaxon(ReferenceTaxon source, ClusterReferenceTaxon target)
           
 void ReferenceTaxonDao.toClusterReferenceTaxon(ReferenceTaxon source, ClusterReferenceTaxon target)
          Copies the fields of the specified entity to the target value object.
 void ReferenceTaxonDaoBase.toClusterReferenceTaxon(ReferenceTaxon source, ClusterReferenceTaxon target)
           
 RemoteReferenceTaxonFullVO ReferenceTaxonDaoImpl.toRemoteReferenceTaxonFullVO(ReferenceTaxon entity)
           
 RemoteReferenceTaxonFullVO ReferenceTaxonDao.toRemoteReferenceTaxonFullVO(ReferenceTaxon entity)
          Converts this DAO's entity to an object of type RemoteReferenceTaxonFullVO.
 RemoteReferenceTaxonFullVO ReferenceTaxonDaoBase.toRemoteReferenceTaxonFullVO(ReferenceTaxon entity)
           
 void ReferenceTaxonDaoImpl.toRemoteReferenceTaxonFullVO(ReferenceTaxon source, RemoteReferenceTaxonFullVO target)
           
 void ReferenceTaxonDao.toRemoteReferenceTaxonFullVO(ReferenceTaxon source, RemoteReferenceTaxonFullVO target)
          Copies the fields of the specified entity to the target value object.
 void ReferenceTaxonDaoBase.toRemoteReferenceTaxonFullVO(ReferenceTaxon source, RemoteReferenceTaxonFullVO target)
           
 RemoteReferenceTaxonNaturalId ReferenceTaxonDaoImpl.toRemoteReferenceTaxonNaturalId(ReferenceTaxon entity)
           
 RemoteReferenceTaxonNaturalId ReferenceTaxonDao.toRemoteReferenceTaxonNaturalId(ReferenceTaxon entity)
          Converts this DAO's entity to an object of type RemoteReferenceTaxonNaturalId.
 RemoteReferenceTaxonNaturalId ReferenceTaxonDaoBase.toRemoteReferenceTaxonNaturalId(ReferenceTaxon entity)
           
 void ReferenceTaxonDaoImpl.toRemoteReferenceTaxonNaturalId(ReferenceTaxon source, RemoteReferenceTaxonNaturalId target)
           
 void ReferenceTaxonDao.toRemoteReferenceTaxonNaturalId(ReferenceTaxon source, RemoteReferenceTaxonNaturalId target)
          Copies the fields of the specified entity to the target value object.
 void ReferenceTaxonDaoBase.toRemoteReferenceTaxonNaturalId(ReferenceTaxon source, RemoteReferenceTaxonNaturalId target)
           
protected  java.lang.Object ReferenceTaxonDaoBase.transformEntity(int transform, ReferenceTaxon entity)
          Allows transformation of entities into value objects (or something else for that matter), when the transform flag is set to one of the constants defined in fr.ifremer.allegro.referential.taxon.ReferenceTaxonDao, please note that the ReferenceTaxonDao.TRANSFORM_NONE constant denotes no transformation, so the entity itself will be returned.
 void ReferenceTaxonDao.update(ReferenceTaxon referenceTaxon)
          Updates the referenceTaxon instance in the persistent store.
 void ReferenceTaxonDaoBase.update(ReferenceTaxon referenceTaxon)
           
 

Uses of ReferenceTaxon in fr.ifremer.allegro.technical.history
 

Methods in fr.ifremer.allegro.technical.history that return ReferenceTaxon
 ReferenceTaxon QualificationHistory.getReferenceTaxon()
           Le taxon pr??cedent.
 

Methods in fr.ifremer.allegro.technical.history with parameters of type ReferenceTaxon
 QualificationHistory QualificationHistoryDao.create(java.lang.Integer objectId, java.lang.String comments, java.lang.Float numericalvalue, java.lang.String previousComments, java.sql.Timestamp updateDate, ObjectType objectType, QualitativeValue qualitativeValue, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, Person recorderPerson, Pmfm pmfm, QualityFlag qualityFlag, Gear gear, Metier metier, Department recorderDepartment)
           Creates a new fr.ifremer.allegro.technical.history.QualificationHistory instance from all attributes and properties and adds it to the persistent store.
 QualificationHistory QualificationHistoryDaoBase.create(java.lang.Integer objectId, java.lang.String comments, java.lang.Float numericalvalue, java.lang.String previousComments, java.sql.Timestamp updateDate, ObjectType objectType, QualitativeValue qualitativeValue, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, Person recorderPerson, Pmfm pmfm, QualityFlag qualityFlag, Gear gear, Metier metier, Department recorderDepartment)
           
 java.lang.Object QualificationHistoryDao.create(int transform, java.lang.Integer objectId, java.lang.String comments, java.lang.Float numericalvalue, java.lang.String previousComments, java.sql.Timestamp updateDate, ObjectType objectType, QualitativeValue qualitativeValue, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, Person recorderPerson, Pmfm pmfm, QualityFlag qualityFlag, Gear gear, Metier metier, Department recorderDepartment)
           Does the same thing as QualificationHistoryDao.create(java.lang.Integer,java.lang.String,java.lang.Float,java.lang.String,java.sql.Timestamp,fr.ifremer.allegro.referential.ObjectType,fr.ifremer.allegro.referential.pmfm.QualitativeValue,fr.ifremer.allegro.referential.taxon.TaxonGroup,fr.ifremer.allegro.referential.taxon.ReferenceTaxon,fr.ifremer.allegro.administration.user.Person,fr.ifremer.allegro.referential.pmfm.Pmfm,fr.ifremer.allegro.referential.QualityFlag,fr.ifremer.allegro.referential.gear.Gear,fr.ifremer.allegro.referential.metier.Metier,fr.ifremer.allegro.administration.user.Department) with an additional flag called transform.
 java.lang.Object QualificationHistoryDaoBase.create(int transform, java.lang.Integer objectId, java.lang.String comments, java.lang.Float numericalvalue, java.lang.String previousComments, java.sql.Timestamp updateDate, ObjectType objectType, QualitativeValue qualitativeValue, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, Person recorderPerson, Pmfm pmfm, QualityFlag qualityFlag, Gear gear, Metier metier, Department recorderDepartment)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(int transform, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional flag called transform.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(int transform, ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int, String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(int transform, java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(int, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(int transform, java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(String, fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional two arguments called pageNumber and pageSize.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(java.lang.String queryString, int pageNumber, int pageSize, ReferenceTaxon referenceTaxon)
           
 java.util.Collection QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           Does the same thing as QualificationHistoryDao.findQualificationHistoryByReferenceTaxon(fr.ifremer.allegro.referential.taxon.ReferenceTaxon) with an additional argument called queryString.
 java.util.Collection QualificationHistoryDaoBase.findQualificationHistoryByReferenceTaxon(java.lang.String queryString, ReferenceTaxon referenceTaxon)
           
static QualificationHistory QualificationHistory.Factory.newInstance(java.lang.Integer objectId, java.lang.String comments, java.lang.Float numericalvalue, java.lang.String previousComments, java.sql.Timestamp updateDate, ObjectType objectType, QualitativeValue qualitativeValue, TaxonGroup taxonGroup, ReferenceTaxon referenceTaxon, Person recorderPerson, Pmfm pmfm, QualityFlag qualityFlag, Gear gear, Metier metier, Department recorderDepartment)
          Constructs a new instance of QualificationHistory, taking all possible properties (except the identifier(s))as arguments.
 void QualificationHistory.setReferenceTaxon(ReferenceTaxon referenceTaxon)
           
 



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